Publication
This page introduces key papers related to Neulite and bionetlite.
Key Papers
1 Kuriyama, R.*, Akira, K.*, Green, L., Herrera, B., Dai, K., Iura, M., Gouaillardet, G., Terasawa, A., Kobayashi, T., Igarashi, Jun., Arkhipov, A., & Yamazaki, T. (2025). Microscopic-Level Mouse Whole Cortex Simulation Composed of 9 Million Biophysical Neurons and 26 Billion Synapses on the Supercomputer Fugaku. In Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis (SC ‘25), November 16–21, 2025, St Louis, MO, USA. ACM, New York, NY, USA, 11 pages.
* Co-first authors
Paper Abstract
This paper reports on research that achieved microscopic-level simulation of whole mouse cortex using the supercomputer Fugaku.
Key Achievements
Whole mouse cortex model containing 9 million biophysical neurons
Complex connection structure with 26 billion synapses
Efficient parallel execution on Fugaku
Detailed biophysical simulation using Perisomatic model
Technical Contributions
bionetlite: Network construction framework extending BMTK
Neulite: Lightweight and high-performance biophysical neuron simulator
Optimization technology: SIMD computation leveraging SVE (Scalable Vector Extensions)